BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB020F02SP1|AL427642
(1053 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1610 1965 0.0
>3x_Contig1610
Length = 13981
Score = 1965 bits (989), Expect = 0.0
Identities = 1044/1057 (98%), Gaps = 6/1057 (0%)
Strand = Plus / Minus
Query: 1 gatcttcctttattctgtaattattcggcgcctactaacgagtttctgagtatgaactct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3504 gatcttcctttattctgtaattattcggcgcctactaacgagtttctgagtatgaactct 3445
Query: 61 cgatcaagtgtctcacgaaccgttctcccttgcacaagacacctaaacgcaaggatacaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3444 cgatcaagtgtctcacgaaccgttctcccttgcacaagacacctaaacgcaaggatacaa 3385
Query: 121 agtgaaatgtttccctgtttcttggatcctaagttcttttgtttacgaaatgttttctag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3384 agtgaaatgtttccctgtttcttggatcctaagttcttttgtttacgaaatgttttctag 3325
Query: 181 ttgtttttgtttgataaatagatgtgaaggaaagaaattctttgaagcttgggaataagc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3324 ttgtttttgtttgataaatagatgtgaaggaaagaaattctttgaagcttgggaataagc 3265
Query: 241 aaaaaataagaaaaagctgtgtagcatcttgtaaagcgcgtttgtgctacgatttggagt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3264 aaaaaataagaaaaagctgtgtagcatcttgtaaagcgcgtttgtgctacgatttggagt 3205
Query: 301 ggaatcagatggaaagtaaaagagtctgttacccggatatattgcctagaaaacaatgta 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3204 ggaatcagatggaaagtaaaagagtctgttacccggatatattgcctagaaaacaatgta 3145
Query: 361 tgaaccccataaatgaagagaaaaatagggatcgtgctcctgtttaacggagggtaactt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3144 tgaaccccataaatgaagagaaaaatagggatcgtgctcctgtttaacggagggtaactt 3085
Query: 421 atatactgctagggaagaaagaattttttgccactcaactgcaaatagccgggtaaatag 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3084 atatactgctagggaagaaagaattttttgccactcaactgcaaatagccgggtaaatag 3025
Query: 481 ttggcgtta-sttgttcacgtgacttgtaattcgtgtttcaaaccgagtaataagggtat 539
||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3024 ttggcgttagcttgttcacgtgacttgtaattcgtgtttcaaaccgagtaataagggtat 2965
Query: 540 tatcattagctatatggatcaaggataatatatatgtagatatagatagttagttagatg 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2964 tatcattagctatatggatcaaggataatatatatgtagatatagatagttagttagatg 2905
Query: 600 atgcaataacttgcgagaccatccagctctatggggcgtatttcttgatcaattggtcaa 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2904 atgcaataacttgcgagaccatccagctctatggggcgtatttcttgatcaattggtcaa 2845
Query: 660 ccaattcgatgtactgttgttcggcatcttcttgggaagtgcccttcaacaattcccagg 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2844 ccaattcgatgtactgttgttcggcatcttcttgggaagtgcccttcaacaattcccagg 2785
Query: 720 cgtcccacttgtaacggtccttcaagttgaacatgcctggtttttccttggtgttgtcac 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2784 cgtcccacttgtaacggtccttcaagttgaacatgcctggtttttccttggtgttgtcac 2725
Query: 780 cgacggttgcttgcttgtatagagcatacaatttcaacaattcatcgttatttggagttg 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2724 cgacggttgcttgcttgtatagagcatacaatttcaacaattcatcgttatttggagttg 2665
Query: 840 atggc-attcattgacagcttta-sctgcagataaatgtaagatgcggttagtatgatta 897
||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 2664 atggcaattcattgacagctttagcctgcagataaatgtaagatgcggttagtatgatta 2605
Query: 898 ttaagggaawcaaaaagccattgcaacaacgattccacataccttttcttcgaataattt 957
||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 2604 ttaagggaaatcaaaagccattgcaacaacgattccacataccttttcttcgaataa-tt 2546
Query: 958 gagaaacaattgtgttttgagtgagtgtcgatatctgacgtattgaactaacacttgtct 1017
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2545 gagaaaccattgtgttttgagtgagtgtcgatatctgacgtattgaactaacacttgtct 2486
Query: 1018 ttcacaaatccttcgtttagta-catgtgtawagctt 1053
||||||||||| |||||||||| |||||||| |||||
Sbjct: 2485 ttcacaaatcc-tcgtttagtaccatgtgtaaagctt 2450
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8771
Number of Sequences: 1807
Number of extensions: 8771
Number of successful extensions: 80
Number of sequences better than 1.0e-20: 1
length of query: 1053
length of database: 10,358,551
effective HSP length: 16
effective length of query: 1037
effective length of database: 10,329,639
effective search space: 10711835643
effective search space used: 10711835643
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.9 bits)